MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,806
rRNA: 9
tRNA: 59
tmRNA: 1
Total number of protein coding genes annotated/found:
1,747
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5026|JADGKX010000004.1
MBF0771116.1
Genome Viewer
NA
AA
834/278
5749-4916
transketolase
SEQF5026|JADGKX010000004.1
MBF0771117.1
Genome Viewer
NA
AA
1020/340
5883-6902
LacI family DNA-binding transcriptional regulator
SEQF5026|JADGKX010000004.1
MBF0771118.1
Genome Viewer
NA
AA
1461/487
7003-8463
L-fucose/L-arabinose isomerase family protein
SEQF5026|JADGKX010000004.1
MBF0771119.1
Genome Viewer
NA
AA
1299/433
8492-9790
DUF4038 domain-containing protein
SEQF5026|JADGKX010000004.1
MBF0771120.1
Genome Viewer
NA
AA
843/281
9955-10797
PRD domain-containing protein
SEQF5026|JADGKX010000004.1
MBF0771121.1
Genome Viewer
NA
AA
2193/731
10803-12995
PTS glucose transporter subunit IIA
SEQF5026|JADGKX010000004.1
MBF0771122.1
Genome Viewer
NA
AA
957/319
14013-13057
LacI family DNA-binding transcriptional regulator
SEQF5026|JADGKX010000004.1
MBF0771123.1
Genome Viewer
NA
AA
1227/409
14182-15408
MFS transporter
SEQF5026|JADGKX010000004.1
MBF0771124.1
Genome Viewer
NA
AA
1533/511
15423-16955
DUF5060 domain-containing protein
SEQF5026|JADGKX010000004.1
MBF0771125.1
Genome Viewer
NA
AA
645/215
17067-17711
nitroreductase family protein
SEQF5026|JADGKX010000004.1
MBF0771126.1
Genome Viewer
NA
AA
1152/384
17804-18955
NADH-dependent flavin oxidoreductase
SEQF5026|JADGKX010000004.1
MBF0771127.1
Genome Viewer
NA
AA
393/131
19029-19421
nuclear transport factor 2 family protein
SEQF5026|JADGKX010000004.1
MBF0771128.1
Genome Viewer
NA
AA
1131/377
20176-21306
glycerate kinase
SEQF5026|JADGKX010000004.1
MBF0771129.1
Genome Viewer
NA
AA
150/50
21369-21518
type II toxin-antitoxin system prevent-host-death family antitoxin
SEQF5026|JADGKX010000004.1
MBF0771130.1
Genome Viewer
NA
AA
1590/530
22740-24329
ABC transporter ATP-binding protein
SEQF5026|JADGKX010000004.1
MBF0771131.1
Genome Viewer
NA
AA
1584/528
24332-25915
ABC transporter ATP-binding protein
SEQF5026|JADGKX010000004.1
MBF0771132.1
Genome Viewer
NA
AA
1287/429
26120-27406
phosphopyruvate hydratase
SEQF5026|JADGKX010000004.1
MBF0771133.1
Genome Viewer
NA
AA
1182/394
28677-27496
MFS transporter
SEQF5026|JADGKX010000004.1
MBF0771134.1
Genome Viewer
NA
AA
483/161
28856-29338
nitroreductase family protein
SEQF5026|JADGKX010000004.1
MBF0771135.1
Genome Viewer
NA
AA
336/112
31154-31489
hypothetical protein
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Items 21 - 40
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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